Scientist II, Clinical Bioinformatics

Full Timejunior

Pleasanton, California, USA HQPosted 14 days ago

Role Overview

10xgenomics is hiring a entry-level Scientist II, Clinical Bioinformatics. This is a full-time role in Pleasanton, California, USA HQ. posted 2 weeks ago. Full responsibilities, required qualifications, and the apply link are listed in the description below.

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Job description

About The Role

10x Genomics is establishing a diagnostics effort, translating our leading single-cell and spatial assay technologies into impactful clinical applications. We are seeking a Scientist II to join the clinical bioinformatics team. The ideal candidate excels at distilling complex biological questions into actionable computational strategies, implementing computational/statistical methods and applying them to large-scale single-cell or spatial transcriptomics datasets to derive clinically meaningful insights.

The role requires a biology-first mindset, proficiency with large-scale bioinformatics analyses, strong scientific acumen and statistical rigor. The successful candidate will have an opportunity to work with some of the largest biomedical datasets assayed using cutting-edge 10x Genomics technologies, deriving clinical insights that power the next generation of clinical diagnostics.

What You Will Be Doing:

Implement rigorous computational/statistical methods for single-cell and spatial transcriptomics data analysis.
Derive actionable insights from clinical/translational single-cell or in-situ spatial datasets.
Design, implement and validate biomarkers for diagnostic applications.
Implement and maintain bioinformatics pipelines for reproducible, large-scale data processing.
Process and analyze single-cell or in-situ spatial transcriptomics datasets spanning hundreds to thousands of samples.

To Be Successful, You Will Need:

Ph.D. in bioinformatics, computational biology, genomics or a related discipline with extensive hands-on experience in single-cell NGS data analysis.
A minimum of 2 years of industry experience post Ph.D.
Experience analyzing large-scale single-cell or spatial transcriptomics datasets to derive biologically meaningful insights and/or diagnostic biomarkers.
In-depth understanding of the assumptions, limitations and caveats of statistical methods.
Experience developing and optimizing high-performance, scalable code.
Proficiency working in a Linux environment.
Goal-oriented, self-motivated and an independent problem solver.
Meticulous attention to detail and a conscientious work ethic.

Preferred Skills

Hands-on experience with 10x Genomics single-cell and in-situ transcriptomics technologies is a strong preference
Hands-on research experience in cancer or autoimmune diseases is a strong preference
Knowledge of clinical genomics, biomarker discovery and diagnostics
Development of statistical models and algorithms for single-cell or spatial transcriptomics data
Application of machine learning, particularly in the context of genomics
Proficiency with workflow orchestration frameworks such as Snakemake, Nextflow or Martian
Programming best practices including data analysis reproducibility, version control, design patterns, testing, debugging and profiling
Track record of writing production-level code or maintaining published software packages
High-throughput computing infrastructure such as HPCs or cloud computing

Below is the base pay range for this full-time position. The actual base pay will depend on several factors unique to each candidate, including one’s skills, qualifications, and experience. At 10x, base pay is also just one component of the Company’s total compensation package. This role is also eligible for 10x’s equity grants, its comprehensive health and retirement benefit programs, and its annual bonus program or sales incentive program. During the hiring process, your 10x recruiter can share more about the Company’s total compensation package.

Pay Range

$123,400—$167,000 USD

About 10x Genomics

At 10x Genomics, accelerating our understanding of biology is more than a mission for us. It is a commitment. This is the century of biology, and the breakthroughs we make now have the potential to change the world.

We enable scientists to advance their research, allowing them to address scientific questions they did not even know they could ask. Our tools have enabled fundamental discoveries across biology including cancer, immunology, and neuroscience.

Our teams are empowered and encouraged to follow their passions, pursue new ideas, and perform at their best in an inclusive and dynamic environment. We know that behind every scientific breakthrough, there is a deep infrastructure of talented people driving the life sciences industry and making it possible for scientists and clinicians to make new strides. We are dedicated to finding the very best person for every aspect of our work because the innovations and discoveries that we enable together will lead to better technologies, better treatments, and a better future. Find out how you can make a 10x difference.

Individuals seeking employment at 10x Genomics are considered without regards to race, color, religion, national origin, age, sex, marital status, ancestry, physical or mental disability, veteran status, gender identity, or sexual orientation, or any other characteristic protected by applicable law.

10x does not accept unsolicited applicants submitted by third-party recruiters or agencies. Any resume or application submitted to 10x without a vendor agreement in place will be considered unsolicited and property of 10x, and 10x will not pay a placement fee.

Please be aware of recruitment scams impersonating 10x Genomics. All recruiting communication will come from email addresses @10xgenomics.com. We also want to encourage you to apply to 10x Genomics positions directly on our careers site, Careers.10xgenomics.com or from reputable third party sites, such as LinkedIn or Indeed. We will never request payment or sensitive personal information during the recruiting process.

About 10xgenomics

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Frequently Asked Questions

How do I apply for the Scientist II, Clinical Bioinformatics position at 10xgenomics?

Use the Apply button above to submit your application directly to 10xgenomics. Most applications take less than 5 minutes if your resume and contact details are ready, and you'll be routed to the employer's official application system to finish.

Where is the Scientist II, Clinical Bioinformatics position at 10xgenomics located?

This position is based in Pleasanton, California, USA HQ. 10xgenomics has not indicated remote or hybrid options for this role, so candidates should plan for on-site work.

What does a Scientist II, Clinical Bioinformatics at 10xgenomics earn?

10xgenomics has not disclosed a salary range in this posting. Many employers share specifics later in the interview process; you can also ask during a recruiter screen if compensation transparency is important to you.

When was the Scientist II, Clinical Bioinformatics role at 10xgenomics posted?

This role was posted on June 25, 2026 (14 days ago). It's still listed as actively hiring; we re-confirm openings against the source system multiple times per day and remove closed roles.

Is the Scientist II, Clinical Bioinformatics role at 10xgenomics entry-level?

Yes. This is an entry-level position. Strong candidates typically have 0-2 years of relevant work experience, internships, or significant project work. Read the full description for any specific qualification requirements 10xgenomics has listed.